 |
|
You are here: Foswiki>MITOMAP Web>LocusCytB (15 Sep 2015, UnknownUser)Edit Attach
The Amino Acids of mtCytB (14747-15887)
14755 14764 14773 14782 14791 14800
5' ATG ACC CCA ATA CGC AAA ACT AAC CCC CTA ATA AAA TTA ATT AAC CAC TCA TTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M T P M R K T N P L M K L I N H S F
14809 14818 14827 14836 14845 14854
ATC GAC CTC CCC ACC CCA TCC AAC ATC TCC GCA TGA TGA AAC TTC GGC TCA CTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
I D L P T P S N I S A W W N F G S L
14863 14872 14881 14890 14899 14908
CTT GGC GCC TGC CTG ATC CTC CAA ATC ACC ACA GGA CTA TTC CTA GCC ATG CAC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
L G A C L I L Q I T T G L F L A M H
14917 14926 14935 14944 14953 14962
TAC TCA CCA GAC GCC TCA ACC GCC TTT TCA TCA ATC GCC CAC ATC ACT CGA GAC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
Y S P D A S T A F S S I A H I T R D
14971 14980 14989 14998 15007 15016
GTA AAT TAT GGC TGA ATC ATC CGC TAC CTT CAC GCC AAT GGC GCC TCA ATA TTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
V N Y G W I I R Y L H A N G A S M F
15025 15034 15043 15052 15061 15070
TTT ATC TGC CTC TTC CTA CAC ATC GGG CGA GGC CTA TAT TAC GGA TCA TTT CTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
F I C L F L H I G R G L Y Y G S F L
15079 15088 15097 15106 15115 15124
TAC TCA GAA ACC TGA AAC ATC GGC ATT ATC CTC CTG CTT GCA ACT ATA GCA ACA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
Y S E T W N I G I I L L L A T M A T
15133 15142 15151 15160 15169 15178
GCC TTC ATA GGC TAT GTC CTC CCG TGA GGC CAA ATA TCA TTC TGA GGG GCC ACA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
A F M G Y V L P W G Q M S F W G A T
15187 15196 15205 15214 15223 15232
GTA ATT ACA AAC TTA CTA TCC GCC ATC CCA TAC ATT GGG ACA GAC CTA GTT CAA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
V I T N L L S A I P Y I G T D L V Q
15241 15250 15259 15268 15277 15286
TGA ATC TGA GGA GGC TAC TCA GTA GAC AGT CCC ACC CTC ACA CGA TTC TTT ACC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
W I W G G Y S V D S P T L T R F F T
15295 15304 15313 15322 15331 15340
TTT CAC TTC ATC TTG CCC TTC ATT ATT GCA GCC CTA GCA ACA CTC CAC CTC CTA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
F H F I L P F I I A A L A T L H L L
15349 15358 15367 15376 15385 15394
TTC TTG CAC GAA ACG GGA TCA AAC AAC CCC CTA GGA ATC ACC TCC CAT TCC GAT
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
F L H E T G S N N P L G I T S H S D
15403 15412 15421 15430 15439 15448
AAA ATC ACC TTC CAC CCT TAC TAC ACA ATC AAA GAC GCC CTC GGC TTA CTT CTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
K I T F H P Y Y T I K D A L G L L L
15457 15466 15475 15484 15493 15502
TTC CTT CTC TCC TTA ATG ACA TTA ACA CTA TTC TCA CCA GAC CTC CTA GGC GAC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
F L L S L M T L T L F S P D L L G D
15511 15520 15529 15538 15547 15556
CCA GAC AAT TAT ACC CTA GCC AAC CCC TTA AAC ACC CCT CCC CAC ATC AAG CCC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
P D N Y T L A N P L N T P P H I K P
15565 15574 15583 15592 15601 15610
GAA TGA TAT TTC CTA TTC GCC TAC ACA ATT CTC CGA TCC GTC CCT AAC AAA CTA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
E W Y F L F A Y T I L R S V P N K L
15619 15628 15637 15646 15655 15664
GGA GGC GTC CTT GCC CTA TTA CTA TCC ATC CTC ATC CTA GCA ATA ATC CCC ATC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
G G V L A L L L S I L I L A M I P I
15673 15682 15691 15700 15709 15718
CTC CAT ATA TCC AAA CAA CAA AGC ATA ATA TTT CGC CCA CTA AGC CAA TCA CTT
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
L H M S K Q Q S M M F R P L S Q S L
15727 15736 15745 15754 15763 15772
TAT TGA CTC CTA GCC GCA GAC CTC CTC ATT CTA ACC TGA ATC GGA GGA CAA CCA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
Y W L L A A D L L I L T W I G G Q P
15781 15790 15799 15808 15817 15826
GTA AGC TAC CCT TTT ACC ATC ATT GGA CAA GTA GCA TCC GTA CTA TAC TTC ACA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
V S Y P F T I I G Q V A S V L Y F T
15835 15844 15853 15862 15871 15880
ACA ATC CTA ATC CTA ATA CCA ACT ATC TCC CTA ATT GAA AAC AAA ATA CTC AAA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
T I L I L M P T I S L I E N K M L K
TGG GCC T 3'
--- --- -
W A
Nucleotide 14766C represents a corrected Cambridge sequence error per Andrews etal (1999).
Amino Acid Distribution in human mtCytB
|
Cytb (14747-15887) AA |
# |
% |
|
Ala (A) |
25 |
6.6% |
|
Arg (R) |
7 |
1.8% |
|
Asn (N) |
15 |
3.9% |
|
Asp (D) |
11 |
2.9% |
|
Cys (C) |
2 |
0.5% |
|
Gln (Q) |
8 |
2.1% |
|
Glu (E) |
4 |
1.1% |
|
Gly (G) |
24 |
6.3% |
|
His (H) |
12 |
3.2% |
|
Ile (I) |
39 |
10.3% |
|
End (*) |
0 |
0.0% |
|
Leu1 (L)(UUA/G) |
9 |
2.4% |
|
Leu2 (L)(CUN) |
55 |
14.5% |
|
Lys (K) |
9 |
2.4% |
|
Met (M) |
15 |
3.9% |
|
Phe (F) |
24 |
6.3% |
|
Pro (p) |
23 |
6.1% |
|
Ser1 (S)(UCN) |
25 |
6.6% |
|
Ser2 (S)(AGU/C) |
4 |
1.1% |
|
Thr (T) |
30 |
7.9% |
|
Trp (W) |
12 |
3.2% |
|
Tyr (Y) |
17 |
4.5% |
|
Val (V) |
10 |
2.6% |
|
Cytb Total AA |
380 |
100.0% |
|
Acidic (Asp + Glu) |
15 |
3.9% |
|
Basic (Arg + Lys) |
16 |
4.2% |
|
Aromatic (Phe + Trp + Tyr) |
53 |
13.9% |
|
Hydrophobic (Aromatic + Ile + Leu + Met + Val) |
181 |
47.6% |
|
Molecular Wt |
42737 |
|
|
Average pI |
6.09 |
Amino acid detail: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB. Go to the Human Mitochondrial Genetic Code.
Edit | Attach | Print version | History: r1 | Backlinks | View wiki text | Edit wiki text | More topic actions
Topic revision: r1 - 15 Sep 2015, UnknownUser
Copyright © by the contributing authors. All material on this collaboration platform is the property of the contributing authors. Ideas, requests, problems regarding Foswiki? Send feedback